Dca11296.1
Annotation
- 3-exons
- f-1
- sp|B9ILX8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_262189#unknown#0F0P0C
- AT4G30200.2 | Symbols: VEL1, VIL2 | vernalization5/VIN3-like | chr4:14786852-14790070 REVERSE LENGTH=714
- Repeat List (scaffold1501)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11296.1 |
1 |
573 |
573 |
48.86 |
573 |
46 |
4e-131
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9ILX8_POPTR |
2 |
582 |
582 |
99.82 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11296.1 |
283 |
416 |
573 |
12.73 |
134 |
52 |
3e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G30200.2 |
238 |
378 |
714 |
19.74 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1501 |
Augustus |
mRNA |
49333 |
51417 |
. |
+ |
. |
ID=Dca11296.1;Parent=Dca11296 |
| scaffold1501 |
Augustus |
exon |
49333 |
49955 |
. |
+ |
. |
ID=Dca11296.1.exon1;Parent=Dca11296.1 |
| scaffold1501 |
Augustus |
exon |
50200 |
50421 |
. |
+ |
. |
ID=Dca11296.1.exon2;Parent=Dca11296.1 |
| scaffold1501 |
Augustus |
exon |
50541 |
51417 |
. |
+ |
. |
ID=Dca11296.1.exon3;Parent=Dca11296.1 |
