Dca11330.1
Annotation
- 3-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold1504)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11330.1 |
2 |
154 |
252 |
36.9 |
153 |
61 |
5e-52
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
741 |
893 |
896 |
17.07 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11330.1 |
2 |
139 |
252 |
21.82 |
138 |
40 |
1e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1243 |
1378 |
1401 |
9.7 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1504 |
Augustus |
mRNA |
1 |
3310 |
. |
+ |
. |
ID=Dca11330.1;Parent=Dca11330 |
| scaffold1504 |
Augustus |
exon |
1 |
476 |
. |
+ |
. |
ID=Dca11330.1.exon1;Parent=Dca11330.1 |
| scaffold1504 |
Augustus |
exon |
2266 |
2492 |
. |
+ |
. |
ID=Dca11330.1.exon2;Parent=Dca11330.1 |
| scaffold1504 |
Augustus |
exon |
3255 |
3310 |
. |
+ |
. |
ID=Dca11330.1.exon3;Parent=Dca11330.1 |
