Dca11376.1
Annotation
- 4-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q2QTV1_ORYSJ#Transposable element protein, putative, Retrotrans_gag#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g18420#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold15069)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11376.1 |
63 |
313 |
736 |
13.58 |
251 |
40 |
9e-52
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
11 |
256 |
1717 |
14.32 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11376.1 |
395 |
525 |
736 |
5.84 |
131 |
33 |
2e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
64 |
189 |
192 |
65.62 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold15069 |
Augustus |
mRNA |
2065 |
7240 |
. |
- |
. |
ID=Dca11376.1;Parent=Dca11376 |
| scaffold15069 |
Augustus |
exon |
2065 |
2216 |
. |
- |
. |
ID=Dca11376.1.exon1;Parent=Dca11376.1 |
| scaffold15069 |
Augustus |
exon |
4526 |
5417 |
. |
- |
. |
ID=Dca11376.1.exon2;Parent=Dca11376.1 |
| scaffold15069 |
Augustus |
exon |
5541 |
5759 |
. |
- |
. |
ID=Dca11376.1.exon3;Parent=Dca11376.1 |
| scaffold15069 |
Augustus |
exon |
6293 |
7240 |
. |
- |
. |
ID=Dca11376.1.exon4;Parent=Dca11376.1 |
