Dca11383.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold15076)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11383.1 |
36 |
417 |
426 |
31.69 |
382 |
32 |
2e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
9 |
420 |
1501 |
27.44 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11383.1 |
55 |
225 |
426 |
12.44 |
171 |
31 |
3e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
80 |
250 |
296 |
57.77 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold15076 |
Augustus |
mRNA |
217 |
2731 |
. |
- |
. |
ID=Dca11383.1;Parent=Dca11383 |
| scaffold15076 |
Augustus |
exon |
217 |
1449 |
. |
- |
. |
ID=Dca11383.1.exon1;Parent=Dca11383.1 |
| scaffold15076 |
Augustus |
exon |
2684 |
2731 |
. |
- |
. |
ID=Dca11383.1.exon2;Parent=Dca11383.1 |
