Carnation DB

Dca11535.1

Annotation

6-exons
f-1
sp|B9HHD3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_819718#GO:0016192#0F1P0C
AT5G01430.1 | Symbols: | Got1/Sft2-like vescicle transport protein family | chr5:176797-178010 REVERSE LENGTH=140
Repeat List (scaffold1516)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11535.1	1	140	140	82.14	140	83	5e-62
Target_name	Start	End	Length	Cov(%)
sp\|B9HHD3_POPTR	1	140	140	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11535.1	1	140	140	79.28	140	80	6e-61
Target_name	Start	End	Length	Cov(%)
AT5G01430.1	1	140	140	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1516	Augustus	mRNA	5384	7448	.	+	.	ID=Dca11535.1;Parent=Dca11535
scaffold1516	Augustus	exon	5384	5414	.	+	.	ID=Dca11535.1.exon1;Parent=Dca11535.1
scaffold1516	Augus-PASA	exon	6413	6504	.	+	.	ID=Dca11535.1.exon2;Parent=Dca11535.1
scaffold1516	Augus-PASA	exon	6593	6673	.	+	.	ID=Dca11535.1.exon3;Parent=Dca11535.1
scaffold1516	Augus-PASA	exon	6765	6862	.	+	.	ID=Dca11535.1.exon4;Parent=Dca11535.1
scaffold1516	Augus-PASA	exon	6943	7024	.	+	.	ID=Dca11535.1.exon5;Parent=Dca11535.1
scaffold1516	Augus-PASA	exon	7410	7448	.	+	.	ID=Dca11535.1.exon6;Parent=Dca11535.1