Carnation DB

Dca11538.1

Annotation

7-exons
f-1
sp|B9N2T6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_924797#unknown#0F0P0C
Repeat List (scaffold1516)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11538.1	35	472	472	37.92	438	41	5e-76
Target_name	Start	End	Length	Cov(%)
sp\|B9N2T6_POPTR	11	365	365	97.26

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11538.1	56	430	472	29.02	375	36	2e-56
Target_name	Start	End	Length	Cov(%)
AT1G32730.1	19	317	327	91.43

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1516	Augustus	mRNA	41408	47186	.	+	.	ID=Dca11538.1;Parent=Dca11538
scaffold1516	Augustus	exon	41408	41640	.	+	.	ID=Dca11538.1.exon1;Parent=Dca11538.1
scaffold1516	Augustus	exon	42915	42976	.	+	.	ID=Dca11538.1.exon2;Parent=Dca11538.1
scaffold1516	Augustus	exon	43599	43689	.	+	.	ID=Dca11538.1.exon3;Parent=Dca11538.1
scaffold1516	Augustus	exon	45173	45234	.	+	.	ID=Dca11538.1.exon4;Parent=Dca11538.1
scaffold1516	Augustus	exon	45858	46035	.	+	.	ID=Dca11538.1.exon5;Parent=Dca11538.1
scaffold1516	Augustus	exon	46297	46399	.	+	.	ID=Dca11538.1.exon6;Parent=Dca11538.1
scaffold1516	Augustus	exon	46497	47186	.	+	.	ID=Dca11538.1.exon7;Parent=Dca11538.1