Carnation DB

Dca11548.1

Annotation

6-exons
f-1
sp|A9PAR9_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0008409;GO:0003677#2F0P0C
AT1G34380.2 | Symbols: | 5'-3' exonuclease family protein | chr1:12552839-12554299 REVERSE LENGTH=347
Repeat List (scaffold1517)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11548.1	48	314	314	58.28	267	69	6e-105
Target_name	Start	End	Length	Cov(%)
sp\|A9PAR9_POPTR	96	358	375	70.13

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11548.1	50	310	314	55.09	261	66	1e-97
Target_name	Start	End	Length	Cov(%)
AT1G34380.2	90	341	347	72.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1517	Augustus	mRNA	45726	49278	.	+	.	ID=Dca11548.1;Parent=Dca11548
scaffold1517	Augustus	exon	45726	45864	.	+	.	ID=Dca11548.1.exon1;Parent=Dca11548.1
scaffold1517	Augustus	exon	45964	46046	.	+	.	ID=Dca11548.1.exon2;Parent=Dca11548.1
scaffold1517	Augustus	exon	48197	48367	.	+	.	ID=Dca11548.1.exon3;Parent=Dca11548.1
scaffold1517	Augustus	exon	48442	48676	.	+	.	ID=Dca11548.1.exon4;Parent=Dca11548.1
scaffold1517	Augustus	exon	48857	49079	.	+	.	ID=Dca11548.1.exon5;Parent=Dca11548.1
scaffold1517	Augustus	exon	49185	49278	.	+	.	ID=Dca11548.1.exon6;Parent=Dca11548.1