Carnation DB

Dca11573.1

Annotation

5-exons
f-4
sp|B9H3Z7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_714495#GO:0016747;GO:0006633#1F1P0C
Repeat List (scaffold15181)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11573.1	1	174	174	91.95	174	92	1e-91
Target_name	Start	End	Length	Cov(%)
sp\|B9H3Z7_POPTR	298	471	471	36.94

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11573.1	1	174	174	87.93	174	88	2e-90
Target_name	Start	End	Length	Cov(%)
Os06t0196600-01	292	465	466	37.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold15181	Augustus	mRNA	1166	2775	.	+	.	ID=Dca11573.1;Parent=Dca11573
scaffold15181	Augustus	exon	1166	1339	.	+	.	ID=Dca11573.1.exon1;Parent=Dca11573.1
scaffold15181	Augustus	exon	1682	1795	.	+	.	ID=Dca11573.1.exon2;Parent=Dca11573.1
scaffold15181	Augustus	exon	1877	1978	.	+	.	ID=Dca11573.1.exon3;Parent=Dca11573.1
scaffold15181	Augustus	exon	2381	2447	.	+	.	ID=Dca11573.1.exon4;Parent=Dca11573.1
scaffold15181	Augustus	exon	2708	2775	.	+	.	ID=Dca11573.1.exon5;Parent=Dca11573.1