Dca1158.1
Annotation
- 2-exons
- f-1
- sp|E5GBG5_CUCME#Ty1-copia retrotransposon protein#Cucumis melo subsp melo#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold1032)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1158.1 |
56 |
363 |
365 |
36.43 |
308 |
42 |
5e-59
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E5GBG5_CUCME |
212 |
494 |
1038 |
27.26 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1158.1 |
260 |
341 |
365 |
10.41 |
82 |
45 |
6e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0327700-01 |
1 |
86 |
87 |
98.85 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1032 |
Augustus |
mRNA |
50389 |
51937 |
. |
- |
. |
ID=Dca1158.1;Parent=Dca1158 |
| scaffold1032 |
Augustus |
exon |
50389 |
51349 |
. |
- |
. |
ID=Dca1158.1.exon1;Parent=Dca1158.1 |
| scaffold1032 |
Augustus |
exon |
51801 |
51937 |
. |
- |
. |
ID=Dca1158.1.exon2;Parent=Dca1158.1 |
