Dca11587.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold1519)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11587.1 |
1 |
234 |
240 |
64.16 |
234 |
61 |
6e-85
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
638 |
893 |
896 |
28.57 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11587.1 |
1 |
225 |
240 |
34.58 |
225 |
34 |
1e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1147 |
1384 |
1401 |
16.98 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1519 |
Augustus |
mRNA |
86548 |
87336 |
. |
+ |
. |
ID=Dca11587.1;Parent=Dca11587 |
| scaffold1519 |
Augustus |
exon |
86548 |
87044 |
. |
+ |
. |
ID=Dca11587.1.exon1;Parent=Dca11587.1 |
| scaffold1519 |
Augustus |
exon |
87111 |
87336 |
. |
+ |
. |
ID=Dca11587.1.exon2;Parent=Dca11587.1 |
