Carnation DB

Dca11624.1

Annotation

6-exons
f-1
sp|F2CT83_HORVD#Predicted protein#Hordeum vulgare var distichum (Two-rowed barley)#unknown#GO:0015031#0F1P0C
AT2G19830.1 | Symbols: SNF7.2, VPS32 | SNF7 family protein | chr2:8558101-8559389 REVERSE LENGTH=213
Repeat List (scaffold152)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11624.1	3	220	220	70	218	70	4e-79
Target_name	Start	End	Length	Cov(%)
sp\|F2CT83_HORVD	2	222	222	99.54

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11624.1	5	220	220	77.72	216	79	5e-84
Target_name	Start	End	Length	Cov(%)
AT2G19830.1	2	213	213	99.53

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold152	Augus-PASA	mRNA	247088	251354	.	-	.	ID=Dca11624.1;Parent=Dca11624
scaffold152	Augus-PASA	exon	247088	247267	.	-	.	ID=Dca11624.1.exon1;Parent=Dca11624.1
scaffold152	Augus-PASA	exon	247469	247580	.	-	.	ID=Dca11624.1.exon2;Parent=Dca11624.1
scaffold152	Augus-PASA	exon	248873	248964	.	-	.	ID=Dca11624.1.exon3;Parent=Dca11624.1
scaffold152	Augus-PASA	exon	249161	249246	.	-	.	ID=Dca11624.1.exon4;Parent=Dca11624.1
scaffold152	Augus-PASA	exon	249898	249997	.	-	.	ID=Dca11624.1.exon5;Parent=Dca11624.1
scaffold152	Augustus	exon	251262	251354	.	-	.	ID=Dca11624.1.exon6;Parent=Dca11624.1