Carnation DB

Dca11632.1

Annotation

9-exons
f-1
sp|F6H509_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0028g01980#GO:0015934;GO:0003723;GO:0003735;GO:0006412#2F1P1C
AT2G42710.1 | Symbols: | Ribosomal protein L1p/L10e family | chr2:17782352-17784830 FORWARD LENGTH=415
Repeat List (scaffold152)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11632.1	59	382	384	51.82	324	52	3e-84
Target_name	Start	End	Length	Cov(%)
sp\|F6H509_VITVI	42	427	429	89.97

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11632.1	66	384	384	46.61	319	50	4e-82
Target_name	Start	End	Length	Cov(%)
AT2G42710.1	62	415	415	85.3

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold152	Augus-PASA	mRNA	316750	325209	.	-	.	ID=Dca11632.1;Parent=Dca11632
scaffold152	Augus-PASA	exon	316750	316827	.	-	.	ID=Dca11632.1.exon1;Parent=Dca11632.1
scaffold152	Augus-PASA	exon	317108	317154	.	-	.	ID=Dca11632.1.exon2;Parent=Dca11632.1
scaffold152	Augus-PASA	exon	318961	319048	.	-	.	ID=Dca11632.1.exon3;Parent=Dca11632.1
scaffold152	Augus-PASA	exon	319487	319591	.	-	.	ID=Dca11632.1.exon4;Parent=Dca11632.1
scaffold152	Augus-PASA	exon	319670	319711	.	-	.	ID=Dca11632.1.exon5;Parent=Dca11632.1
scaffold152	Augus-PASA	exon	319802	319860	.	-	.	ID=Dca11632.1.exon6;Parent=Dca11632.1
scaffold152	Augustus	exon	321676	321781	.	-	.	ID=Dca11632.1.exon7;Parent=Dca11632.1
scaffold152	Augustus	exon	321883	321924	.	-	.	ID=Dca11632.1.exon8;Parent=Dca11632.1
scaffold152	Augustus	exon	324622	325209	.	-	.	ID=Dca11632.1.exon9;Parent=Dca11632.1