Carnation DB

Dca11638.1

Annotation

17-exons
f-1
sp|B9GH29_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1067679#GO:0005524;GO:0003684;GO:0017111;GO:0006281#3F1P0C
AT5G50340.1 | Symbols: | ATP-dependent peptidases;nucleotide binding;serine-type endopeptidases;DNA helicases;ATP binding;damaged DNA binding;nucleoside-triphosphatases | chr5:20491635-20495830 REVERSE LENGTH=587
Repeat List (scaffold152)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11638.1	107	526	1084	22.5	420	55	3e-127
Target_name	Start	End	Length	Cov(%)
sp\|B9GH29_POPTR	102	518	525	79.42

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11638.1	138	523	1084	20.66	386	55	2e-120
Target_name	Start	End	Length	Cov(%)
AT5G50340.1	195	577	587	65.24

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold152	Augustus	mRNA	370935	389270	.	+	.	ID=Dca11638.1;Parent=Dca11638
scaffold152	Augustus	exon	370935	371341	.	+	.	ID=Dca11638.1.exon1;Parent=Dca11638.1
scaffold152	Augustus	exon	371765	371820	.	+	.	ID=Dca11638.1.exon2;Parent=Dca11638.1
scaffold152	Augustus	exon	372834	372892	.	+	.	ID=Dca11638.1.exon3;Parent=Dca11638.1
scaffold152	Augustus	exon	372988	373059	.	+	.	ID=Dca11638.1.exon4;Parent=Dca11638.1
scaffold152	Augustus	exon	374826	374909	.	+	.	ID=Dca11638.1.exon5;Parent=Dca11638.1
scaffold152	Augustus	exon	375168	375275	.	+	.	ID=Dca11638.1.exon6;Parent=Dca11638.1
scaffold152	Augustus	exon	375439	375501	.	+	.	ID=Dca11638.1.exon7;Parent=Dca11638.1
scaffold152	Augustus	exon	375895	375975	.	+	.	ID=Dca11638.1.exon8;Parent=Dca11638.1
scaffold152	Augustus	exon	377795	377935	.	+	.	ID=Dca11638.1.exon9;Parent=Dca11638.1
scaffold152	Augustus	exon	378661	378816	.	+	.	ID=Dca11638.1.exon10;Parent=Dca11638.1
scaffold152	Augustus	exon	378975	379058	.	+	.	ID=Dca11638.1.exon11;Parent=Dca11638.1
scaffold152	Augustus	exon	379745	379783	.	+	.	ID=Dca11638.1.exon12;Parent=Dca11638.1
scaffold152	Augustus	exon	380502	380588	.	+	.	ID=Dca11638.1.exon13;Parent=Dca11638.1
scaffold152	Augustus	exon	382720	382857	.	+	.	ID=Dca11638.1.exon14;Parent=Dca11638.1
scaffold152	Augustus	exon	387246	388148	.	+	.	ID=Dca11638.1.exon15;Parent=Dca11638.1
scaffold152	Augustus	exon	388276	388316	.	+	.	ID=Dca11638.1.exon16;Parent=Dca11638.1
scaffold152	Augustus	exon	388535	389270	.	+	.	ID=Dca11638.1.exon17;Parent=Dca11638.1