Dca11642.1
Annotation
- 3-exons
- f-1
- sp|B9GH29_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1067679#GO:0005524;GO:0003684;GO:0017111;GO:0006281#3F1P0C
- Os06t0151600-01 DNA repair protein RadA family protein.
- Repeat List (scaffold152)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11642.1 |
5 |
59 |
117 |
27.35 |
55 |
58 |
3e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GH29_POPTR |
462 |
517 |
525 |
10.66 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11642.1 |
5 |
60 |
117 |
25.64 |
56 |
53 |
9e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G50340.1 |
524 |
580 |
587 |
9.71 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold152 |
Augustus |
mRNA |
419152 |
421640 |
. |
- |
. |
ID=Dca11642.1;Parent=Dca11642 |
| scaffold152 |
Augustus |
exon |
419152 |
419328 |
. |
- |
. |
ID=Dca11642.1.exon1;Parent=Dca11642.1 |
| scaffold152 |
Augustus |
exon |
420048 |
420185 |
. |
- |
. |
ID=Dca11642.1.exon2;Parent=Dca11642.1 |
| scaffold152 |
Augustus |
exon |
421602 |
421640 |
. |
- |
. |
ID=Dca11642.1.exon3;Parent=Dca11642.1 |
