Dca11652.1
Annotation
- 3-exons
- f-1
- sp|O23529_ARATH#Retrotransposon like protein#Arabidopsis thaliana (Mouse-ear cress)#Name=dl4465c#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold1520)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11652.1 |
128 |
607 |
635 |
41.1 |
480 |
49 |
6e-146
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O23529_ARATH |
939 |
1470 |
1474 |
36.09 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11652.1 |
155 |
602 |
635 |
29.29 |
448 |
38 |
7e-97
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
889 |
1389 |
1401 |
35.76 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1520 |
Augustus |
mRNA |
36382 |
40116 |
. |
- |
. |
ID=Dca11652.1;Parent=Dca11652 |
| scaffold1520 |
Augustus |
exon |
36382 |
37382 |
. |
- |
. |
ID=Dca11652.1.exon1;Parent=Dca11652.1 |
| scaffold1520 |
Augustus |
exon |
37541 |
38381 |
. |
- |
. |
ID=Dca11652.1.exon2;Parent=Dca11652.1 |
| scaffold1520 |
Augustus |
exon |
40051 |
40116 |
. |
- |
. |
ID=Dca11652.1.exon3;Parent=Dca11652.1 |
