Dca11718.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold1526)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11718.1 |
2 |
250 |
352 |
45.73 |
249 |
65 |
8e-95
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
135 |
381 |
964 |
25.62 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11718.1 |
1 |
229 |
352 |
26.98 |
229 |
41 |
1e-45
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
548 |
779 |
1428 |
16.24 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1526 |
Augustus |
mRNA |
72653 |
78110 |
. |
+ |
. |
ID=Dca11718.1;Parent=Dca11718 |
| scaffold1526 |
Augustus |
exon |
72653 |
73364 |
. |
+ |
. |
ID=Dca11718.1.exon1;Parent=Dca11718.1 |
| scaffold1526 |
Augustus |
exon |
77765 |
78110 |
. |
+ |
. |
ID=Dca11718.1.exon2;Parent=Dca11718.1 |
