Dca11729.1
Annotation
- 2-exons
- f-1
- sp|F4NCH8_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- sp|O22148_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g45230#GO:0004523;GO:0003723;GO:0003964;GO:0006278#3F1P0C
- Repeat List (scaffold1527)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11729.1 |
45 |
899 |
918 |
35.29 |
855 |
37 |
4e-153
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCH8_BETVU |
434 |
1296 |
1365 |
63.22 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11729.1 |
69 |
522 |
918 |
16.77 |
454 |
34 |
1e-75
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
365 |
818 |
857 |
52.97 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1527 |
Augustus |
mRNA |
54300 |
57140 |
. |
- |
. |
ID=Dca11729.1;Parent=Dca11729 |
| scaffold1527 |
Augustus |
exon |
54300 |
55480 |
. |
- |
. |
ID=Dca11729.1.exon1;Parent=Dca11729.1 |
| scaffold1527 |
Augustus |
exon |
55565 |
57140 |
. |
- |
. |
ID=Dca11729.1.exon2;Parent=Dca11729.1 |
