Dca11759.1
Annotation
- 4-exons
- f-1
- sp|Q9LHM4_ARATH#Gypsy/Ty-3 retroelement polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=T21B14.24#GO:0005634;GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P1C
- Repeat List (scaffold1529)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11759.1 |
1 |
501 |
503 |
56.06 |
501 |
48 |
5e-154
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9LHM4_ARATH |
912 |
1497 |
1499 |
39.09 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11759.1 |
1 |
501 |
503 |
36.97 |
501 |
32 |
1e-89
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
897 |
1475 |
1539 |
37.62 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1529 |
Augustus |
mRNA |
20099 |
21967 |
. |
+ |
. |
ID=Dca11759.1;Parent=Dca11759 |
| scaffold1529 |
Augustus |
exon |
20099 |
20417 |
. |
+ |
. |
ID=Dca11759.1.exon1;Parent=Dca11759.1 |
| scaffold1529 |
Augustus |
exon |
20510 |
20582 |
. |
+ |
. |
ID=Dca11759.1.exon2;Parent=Dca11759.1 |
| scaffold1529 |
Augustus |
exon |
20742 |
21060 |
. |
+ |
. |
ID=Dca11759.1.exon3;Parent=Dca11759.1 |
| scaffold1529 |
Augustus |
exon |
21167 |
21967 |
. |
+ |
. |
ID=Dca11759.1.exon4;Parent=Dca11759.1 |
