Carnation DB

Dca1178.1

Annotation

7-exons
f-1
sp|G7JW96_MEDTR#Thaumatin-like protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_5g022310#unknown#0F0P0C
Repeat List (scaffold1033)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1178.1	117	379	604	18.7	263	42	3e-52
Target_name	Start	End	Length	Cov(%)
sp\|G7JW96_MEDTR	8	269	300	87.33

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1178.1	114	364	604	17.88	251	42	2e-51
Target_name	Start	End	Length	Cov(%)
AT1G75800.1	1	254	330	76.96

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1033	Augustus	mRNA	47312	51525	.	-	.	ID=Dca1178.1;Parent=Dca1178
scaffold1033	Augustus	exon	47312	47629	.	-	.	ID=Dca1178.1.exon1;Parent=Dca1178.1
scaffold1033	Augustus	exon	48987	49114	.	-	.	ID=Dca1178.1.exon2;Parent=Dca1178.1
scaffold1033	Augustus	exon	49186	49314	.	-	.	ID=Dca1178.1.exon3;Parent=Dca1178.1
scaffold1033	Augustus	exon	49405	49553	.	-	.	ID=Dca1178.1.exon4;Parent=Dca1178.1
scaffold1033	Augustus	exon	49804	50500	.	-	.	ID=Dca1178.1.exon5;Parent=Dca1178.1
scaffold1033	Augustus	exon	50649	50754	.	-	.	ID=Dca1178.1.exon6;Parent=Dca1178.1
scaffold1033	Augustus	exon	51238	51525	.	-	.	ID=Dca1178.1.exon7;Parent=Dca1178.1