Dca11828.1
Annotation
- 4-exons
- f-1
- sp|A5BMD2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_043214#GO:0003676;GO:0015074#1F1P0C
- sp|Q9LMV1_ARATH#F5M15.26#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold1531)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11828.1 |
13 |
294 |
297 |
38.04 |
282 |
33 |
4e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BMD2_VITVI |
772 |
1112 |
1496 |
22.79 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11828.1 |
68 |
123 |
297 |
8.08 |
56 |
43 |
1e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
65 |
120 |
591 |
9.47 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1531 |
Augustus |
mRNA |
27429 |
28986 |
. |
- |
. |
ID=Dca11828.1;Parent=Dca11828 |
| scaffold1531 |
Augustus |
exon |
27429 |
27780 |
. |
- |
. |
ID=Dca11828.1.exon1;Parent=Dca11828.1 |
| scaffold1531 |
Augustus |
exon |
27886 |
28059 |
. |
- |
. |
ID=Dca11828.1.exon2;Parent=Dca11828.1 |
| scaffold1531 |
Augustus |
exon |
28484 |
28650 |
. |
- |
. |
ID=Dca11828.1.exon3;Parent=Dca11828.1 |
| scaffold1531 |
Augustus |
exon |
28786 |
28986 |
. |
- |
. |
ID=Dca11828.1.exon4;Parent=Dca11828.1 |
