Carnation DB

Dca11844.1

Annotation

5-exons
f-1
sp|F4NCG3_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Os03t0643433-00 Similar to J013022N21, full insert sequence.
Repeat List (scaffold1532)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11844.1	101	475	554	26.89	375	37	2e-73
Target_name	Start	End	Length	Cov(%)
sp\|F4NCG3_BETVU	617	1026	1114	36.8

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11844.1	109	368	554	14.8	260	32	2e-33
Target_name	Start	End	Length	Cov(%)
Os03t0643433-00	144	403	644	40.37

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1532	Augustus	mRNA	7048	11079	.	-	.	ID=Dca11844.1;Parent=Dca11844
scaffold1532	Augustus	exon	7048	7192	.	-	.	ID=Dca11844.1.exon1;Parent=Dca11844.1
scaffold1532	Augustus	exon	7898	8316	.	-	.	ID=Dca11844.1.exon2;Parent=Dca11844.1
scaffold1532	Augustus	exon	8428	9243	.	-	.	ID=Dca11844.1.exon3;Parent=Dca11844.1
scaffold1532	Augustus	exon	9640	9799	.	-	.	ID=Dca11844.1.exon4;Parent=Dca11844.1
scaffold1532	Augustus	exon	10955	11079	.	-	.	ID=Dca11844.1.exon5;Parent=Dca11844.1