Carnation DB

Dca11864.1

Annotation

5-exons
f-1
sp|B9RSC7_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1474460#unknown#0F0P0C
AT5G58575.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Sgf11, transcriptional regulation (InterPro:IPR013246); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:23674399-23675224 FORWARD LENGTH=181
Repeat List (scaffold1533)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11864.1	92	244	244	44.26	153	62	7e-52
Target_name	Start	End	Length	Cov(%)
sp\|B9RSC7_RICCO	20	193	193	90.15

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11864.1	101	240	244	38.93	140	59	6e-48
Target_name	Start	End	Length	Cov(%)
AT5G58575.1	13	173	181	88.95

seqname	source	feature	start	end	score	strand	frame	group
scaffold1533	Augus-PASA	mRNA	54921	57587	.	-	.	ID=Dca11864.1;Parent=Dca11864
scaffold1533	Augus-PASA	exon	54921	55040	.	-	.	ID=Dca11864.1.exon1;Parent=Dca11864.1
scaffold1533	Augus-PASA	exon	55308	55619	.	-	.	ID=Dca11864.1.exon2;Parent=Dca11864.1
scaffold1533	Augus-PASA	exon	55863	55916	.	-	.	ID=Dca11864.1.exon3;Parent=Dca11864.1
scaffold1533	Augus-PASA	exon	56141	56302	.	-	.	ID=Dca11864.1.exon4;Parent=Dca11864.1
scaffold1533	Augustus	exon	57501	57587	.	-	.	ID=Dca11864.1.exon5;Parent=Dca11864.1