Carnation DB

Dca11883.1

Annotation

5-exons
f-1
sp|A5B4C4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_013863#GO:0003824;GO:0008299#1F1P0C
AT2G02500.1 | Symbols: ISPD, ATMEPCT, MCT | Nucleotide-diphospho-sugar transferases superfamily protein | chr2:671054-673124 REVERSE LENGTH=302
Repeat List (scaffold15344)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11883.1	55	170	170	49.41	116	72	4e-42
Target_name	Start	End	Length	Cov(%)
sp\|A5B4C4_VITVI	60	173	312	36.53

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11883.1	86	170	170	35.29	85	71	7e-32
Target_name	Start	End	Length	Cov(%)
AT2G02500.1	82	166	302	28.14

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold15344	Augustus	mRNA	153	1468	.	-	.	ID=Dca11883.1;Parent=Dca11883
scaffold15344	Augustus	exon	153	235	.	-	.	ID=Dca11883.1.exon1;Parent=Dca11883.1
scaffold15344	Augustus	exon	326	405	.	-	.	ID=Dca11883.1.exon2;Parent=Dca11883.1
scaffold15344	Augustus	exon	522	577	.	-	.	ID=Dca11883.1.exon3;Parent=Dca11883.1
scaffold15344	Augustus	exon	1093	1164	.	-	.	ID=Dca11883.1.exon4;Parent=Dca11883.1
scaffold15344	Augustus	exon	1250	1468	.	-	.	ID=Dca11883.1.exon5;Parent=Dca11883.1