Dca11892.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold1535)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11892.1 |
1 |
683 |
683 |
54.9 |
683 |
51 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
137 |
881 |
1501 |
49.63 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11892.1 |
202 |
682 |
683 |
28.11 |
481 |
38 |
2e-96
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
61 |
569 |
707 |
71.99 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1535 |
Augustus |
mRNA |
56012 |
58132 |
. |
+ |
. |
ID=Dca11892.1;Parent=Dca11892 |
| scaffold1535 |
Augustus |
exon |
56012 |
57034 |
. |
+ |
. |
ID=Dca11892.1.exon1;Parent=Dca11892.1 |
| scaffold1535 |
Augustus |
exon |
57104 |
58132 |
. |
+ |
. |
ID=Dca11892.1.exon2;Parent=Dca11892.1 |
