Dca11956.1
Annotation
- 3-exons
- f-1
- sp|Q9ZPU4_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g13940#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold154)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11956.1 |
28 |
1371 |
1371 |
47.62 |
1344 |
46 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZPU4_ARATH |
72 |
1501 |
1501 |
95.26 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11956.1 |
231 |
1361 |
1371 |
27.57 |
1131 |
32 |
9e-158
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
288 |
1389 |
1401 |
78.65 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold154 |
Augustus |
mRNA |
129877 |
134160 |
. |
- |
. |
ID=Dca11956.1;Parent=Dca11956 |
| scaffold154 |
Augustus |
exon |
129877 |
130404 |
. |
- |
. |
ID=Dca11956.1.exon1;Parent=Dca11956.1 |
| scaffold154 |
Augustus |
exon |
130486 |
133995 |
. |
- |
. |
ID=Dca11956.1.exon2;Parent=Dca11956.1 |
| scaffold154 |
Augustus |
exon |
134083 |
134160 |
. |
- |
. |
ID=Dca11956.1.exon3;Parent=Dca11956.1 |
