Carnation DB

Dca1196.1

Annotation

6-exons
f-1
sp|B9S7H6_RICCO#Poly(RC)-binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0607560#GO:0003723#1F0P0C
Repeat List (scaffold1034)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1196.1	1	538	538	58.92	538	57	6e-164
Target_name	Start	End	Length	Cov(%)
sp\|B9S7H6_RICCO	1	548	548	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1196.1	36	538	538	55.39	503	58	2e-148
Target_name	Start	End	Length	Cov(%)
AT3G04610.1	79	577	577	86.48

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1034	Augustus	mRNA	7668	13153	.	+	.	ID=Dca1196.1;Parent=Dca1196
scaffold1034	Augustus	exon	7668	8201	.	+	.	ID=Dca1196.1.exon1;Parent=Dca1196.1
scaffold1034	Augustus	exon	10273	10522	.	+	.	ID=Dca1196.1.exon2;Parent=Dca1196.1
scaffold1034	Augustus	exon	10896	11044	.	+	.	ID=Dca1196.1.exon3;Parent=Dca1196.1
scaffold1034	Augustus	exon	11126	11407	.	+	.	ID=Dca1196.1.exon4;Parent=Dca1196.1
scaffold1034	Augustus	exon	12342	12536	.	+	.	ID=Dca1196.1.exon5;Parent=Dca1196.1
scaffold1034	Augustus	exon	12947	13153	.	+	.	ID=Dca1196.1.exon6;Parent=Dca1196.1