Carnation DB

Dca11962.1

Annotation

7-exons
f-1
sp|B9N7S4_POPTR#Bile acid:Na+ symporter family protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_274865#GO:0016020;GO:0008508#1F0P1C
Repeat List (scaffold154)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11962.1	1	265	268	79.1	265	80	6e-122
Target_name	Start	End	Length	Cov(%)
sp\|B9N7S4_POPTR	1	265	267	99.25

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11962.1	1	264	268	76.49	264	78	6e-118
Target_name	Start	End	Length	Cov(%)
AT1G78560.1	135	398	401	65.83

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold154	Augustus	mRNA	183425	186489	.	+	.	ID=Dca11962.1;Parent=Dca11962
scaffold154	Augustus	exon	183425	183520	.	+	.	ID=Dca11962.1.exon1;Parent=Dca11962.1
scaffold154	Augustus	exon	184569	184662	.	+	.	ID=Dca11962.1.exon2;Parent=Dca11962.1
scaffold154	Augustus	exon	184750	184783	.	+	.	ID=Dca11962.1.exon3;Parent=Dca11962.1
scaffold154	Augustus	exon	184874	184928	.	+	.	ID=Dca11962.1.exon4;Parent=Dca11962.1
scaffold154	Augustus	exon	185668	185751	.	+	.	ID=Dca11962.1.exon5;Parent=Dca11962.1
scaffold154	Augustus	exon	185832	186119	.	+	.	ID=Dca11962.1.exon6;Parent=Dca11962.1
scaffold154	Augustus	exon	186334	186489	.	+	.	ID=Dca11962.1.exon7;Parent=Dca11962.1