Carnation DB

Dca11968.1

Annotation

6-exons
f-1
sp|C6SWU6_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0016021;GO:0005886;GO:0008643#0F1P2C
sp|G8A244_MEDTR#Protein RUPTURED POLLEN GRAIN#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_130s0009#GO:0016021#0F0P1C
Repeat List (scaffold154)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11968.1	5	234	234	67.94	230	68	6e-86
Target_name	Start	End	Length	Cov(%)
sp\|C6SWU6_SOYBN	2	235	235	99.57

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11968.1	11	233	234	61.96	223	65	4e-79
Target_name	Start	End	Length	Cov(%)
AT3G14770.1	11	235	236	95.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold154	Augus-PASA	mRNA	230547	232705	.	+	.	ID=Dca11968.1;Parent=Dca11968
scaffold154	Augus-PASA	exon	230547	230607	.	+	.	ID=Dca11968.1.exon1;Parent=Dca11968.1
scaffold154	Augus-PASA	exon	231481	231517	.	+	.	ID=Dca11968.1.exon2;Parent=Dca11968.1
scaffold154	Augus-PASA	exon	231629	231845	.	+	.	ID=Dca11968.1.exon3;Parent=Dca11968.1
scaffold154	Augus-PASA	exon	232108	232266	.	+	.	ID=Dca11968.1.exon4;Parent=Dca11968.1
scaffold154	Augus-PASA	exon	232383	232502	.	+	.	ID=Dca11968.1.exon5;Parent=Dca11968.1
scaffold154	Augus-PASA	exon	232595	232705	.	+	.	ID=Dca11968.1.exon6;Parent=Dca11968.1