Carnation DB

Dca11980.1

Annotation

7-exons
f-1
sp|D7TS58_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0051g00350#GO:0008270#1F0P0C
AT3G24010.1 | Symbols: ING1, ATING1 | RING/FYVE/PHD zinc finger superfamily protein | chr3:8676120-8678186 REVERSE LENGTH=234
Repeat List (scaffold1540)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11980.1	10	241	241	69.7	232	73	1e-89
Target_name	Start	End	Length	Cov(%)
sp\|D7TS58_VITVI	5	235	235	98.29

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11980.1	3	241	241	65.97	239	67	1e-81
Target_name	Start	End	Length	Cov(%)
AT3G24010.1	2	234	234	99.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1540	Augustus	mRNA	96992	100370	.	+	.	ID=Dca11980.1;Parent=Dca11980
scaffold1540	Augustus	exon	96992	97022	.	+	.	ID=Dca11980.1.exon1;Parent=Dca11980.1
scaffold1540	Augustus	exon	98500	98571	.	+	.	ID=Dca11980.1.exon2;Parent=Dca11980.1
scaffold1540	Augustus	exon	98703	98890	.	+	.	ID=Dca11980.1.exon3;Parent=Dca11980.1
scaffold1540	Augustus	exon	99214	99277	.	+	.	ID=Dca11980.1.exon4;Parent=Dca11980.1
scaffold1540	Augustus	exon	99373	99472	.	+	.	ID=Dca11980.1.exon5;Parent=Dca11980.1
scaffold1540	Augustus	exon	100014	100173	.	+	.	ID=Dca11980.1.exon6;Parent=Dca11980.1
scaffold1540	Augustus	exon	100260	100370	.	+	.	ID=Dca11980.1.exon7;Parent=Dca11980.1