Dca11981.1
Annotation
- 2-exons
- f-1
- sp|B1N668_SOLLC#Copia LTR rider#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#ORFNames=LYC_68t000004, SUNLYC_67t000007#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold1540)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11981.1 |
1 |
104 |
139 |
38.12 |
104 |
41 |
1e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B1N668_SOLLC |
588 |
719 |
1307 |
10.09 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11981.1 |
1 |
98 |
139 |
25.89 |
98 |
35 |
4e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| ATMG00710.1 |
12 |
112 |
120 |
84.16 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1540 |
Augustus |
mRNA |
108262 |
108765 |
. |
+ |
. |
ID=Dca11981.1;Parent=Dca11981 |
| scaffold1540 |
Augustus |
exon |
108262 |
108451 |
. |
+ |
. |
ID=Dca11981.1.exon1;Parent=Dca11981.1 |
| scaffold1540 |
Augustus |
exon |
108536 |
108765 |
. |
+ |
. |
ID=Dca11981.1.exon2;Parent=Dca11981.1 |
