Carnation DB

Dca11982.1

Annotation

10-exons
f-1
sp|B9HHL6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_820395#unknown#0F0P0C
sp|B3TM50_ELAGV#26S proteasome regulatory particle non-ATPase subunit 8#Elaeis guineensis var tenera (Oil palm)#unknown#GO:0000502#0F0P1C
Repeat List (scaffold1540)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11982.1	1	310	310	92.25	310	93	8e-167
Target_name	Start	End	Length	Cov(%)
sp\|B9HHL6_POPTR	1	310	310	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11982.1	1	308	310	88.06	308	89	6e-161
Target_name	Start	End	Length	Cov(%)
AT5G05780.1	1	308	308	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1540	Augus-PASA	mRNA	115504	120297	.	+	.	ID=Dca11982.1;Parent=Dca11982
scaffold1540	Augus-PASA	exon	115504	115690	.	+	.	ID=Dca11982.1.exon1;Parent=Dca11982.1
scaffold1540	Augus-PASA	exon	117094	117186	.	+	.	ID=Dca11982.1.exon2;Parent=Dca11982.1
scaffold1540	Augus-PASA	exon	117300	117381	.	+	.	ID=Dca11982.1.exon3;Parent=Dca11982.1
scaffold1540	Augus-PASA	exon	118107	118203	.	+	.	ID=Dca11982.1.exon4;Parent=Dca11982.1
scaffold1540	Augus-PASA	exon	118515	118590	.	+	.	ID=Dca11982.1.exon5;Parent=Dca11982.1
scaffold1540	Augus-PASA	exon	118847	118905	.	+	.	ID=Dca11982.1.exon6;Parent=Dca11982.1
scaffold1540	Augus-PASA	exon	119320	119442	.	+	.	ID=Dca11982.1.exon7;Parent=Dca11982.1
scaffold1540	Augus-PASA	exon	119777	119834	.	+	.	ID=Dca11982.1.exon8;Parent=Dca11982.1
scaffold1540	Augus-PASA	exon	119949	120034	.	+	.	ID=Dca11982.1.exon9;Parent=Dca11982.1
scaffold1540	Augus-PASA	exon	120226	120297	.	+	.	ID=Dca11982.1.exon10;Parent=Dca11982.1