Dca12002.1
Annotation
- 3-exons
- f-1
- sp|F6GX79_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0019g01050#GO:0043531;GO:0006952#1F1P0C
- Os08t0543100-00 Similar to NBS-LRR type resistance protein (Fragment).
- Repeat List (scaffold1542)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12002.1 |
18 |
724 |
735 |
29.38 |
707 |
30 |
1e-62
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6GX79_VITVI |
226 |
939 |
940 |
75.95 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12002.1 |
18 |
494 |
735 |
21.22 |
477 |
31 |
7e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0543100-00 |
200 |
681 |
1185 |
40.67 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1542 |
Augustus |
mRNA |
6861 |
11934 |
. |
+ |
. |
ID=Dca12002.1;Parent=Dca12002 |
| scaffold1542 |
Augustus |
exon |
6861 |
6912 |
. |
+ |
. |
ID=Dca12002.1.exon1;Parent=Dca12002.1 |
| scaffold1542 |
Augustus |
exon |
8359 |
9279 |
. |
+ |
. |
ID=Dca12002.1.exon2;Parent=Dca12002.1 |
| scaffold1542 |
Augustus |
exon |
10700 |
11934 |
. |
+ |
. |
ID=Dca12002.1.exon3;Parent=Dca12002.1 |
