Dca12045.1
Annotation
- 4-exons
- f-1
- sp|Q5W6B6_ORYSJ#Putative polyprotein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0037H03.15#GO:0005634;GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P1C
- Repeat List (scaffold1545)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12045.1 |
1 |
375 |
395 |
49.62 |
375 |
46 |
4e-91
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q5W6B6_ORYSJ |
949 |
1375 |
1684 |
25.35 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12045.1 |
2 |
182 |
395 |
22.27 |
181 |
40 |
1e-37
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
335 |
558 |
707 |
31.68 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1545 |
Augustus |
mRNA |
53321 |
54972 |
. |
+ |
. |
ID=Dca12045.1;Parent=Dca12045 |
| scaffold1545 |
Augustus |
exon |
53321 |
53492 |
. |
+ |
. |
ID=Dca12045.1.exon1;Parent=Dca12045.1 |
| scaffold1545 |
Augustus |
exon |
53609 |
53982 |
. |
+ |
. |
ID=Dca12045.1.exon2;Parent=Dca12045.1 |
| scaffold1545 |
Augustus |
exon |
54220 |
54609 |
. |
+ |
. |
ID=Dca12045.1.exon3;Parent=Dca12045.1 |
| scaffold1545 |
Augustus |
exon |
54721 |
54972 |
. |
+ |
. |
ID=Dca12045.1.exon4;Parent=Dca12045.1 |
