Carnation DB

Dca12074.1

Annotation

9-exons
f-1
sp|B9RWE6_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1018610#GO:0005622;GO:0005097#1F0P1C
AT4G13730.1 | Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily protein | chr4:7970299-7974055 FORWARD LENGTH=449
Repeat List (scaffold1547)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12074.1	97	460	461	62.68	364	80	5e-178
Target_name	Start	End	Length	Cov(%)
sp\|B9RWE6_RICCO	104	467	468	77.77

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12074.1	96	456	461	58.56	361	75	2e-165
Target_name	Start	End	Length	Cov(%)
AT4G13730.1	89	447	449	79.95

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1547	Augus-PASA	mRNA	51801	58000	.	-	.	ID=Dca12074.1;Parent=Dca12074
scaffold1547	Augus-PASA	exon	51801	51965	.	-	.	ID=Dca12074.1.exon1;Parent=Dca12074.1
scaffold1547	Augus-PASA	exon	52635	52751	.	-	.	ID=Dca12074.1.exon2;Parent=Dca12074.1
scaffold1547	Augus-PASA	exon	53222	53401	.	-	.	ID=Dca12074.1.exon3;Parent=Dca12074.1
scaffold1547	Augustus	exon	53610	53738	.	-	.	ID=Dca12074.1.exon4;Parent=Dca12074.1
scaffold1547	Augustus	exon	53815	53913	.	-	.	ID=Dca12074.1.exon5;Parent=Dca12074.1
scaffold1547	Augustus	exon	55075	55227	.	-	.	ID=Dca12074.1.exon6;Parent=Dca12074.1
scaffold1547	Augustus	exon	56125	56229	.	-	.	ID=Dca12074.1.exon7;Parent=Dca12074.1
scaffold1547	Augustus	exon	56324	56416	.	-	.	ID=Dca12074.1.exon8;Parent=Dca12074.1
scaffold1547	Augustus	exon	57656	58000	.	-	.	ID=Dca12074.1.exon9;Parent=Dca12074.1