Dca12097.1
Annotation
- 3-exons
- f-1
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold15499)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12097.1 |
171 |
524 |
541 |
44.36 |
354 |
62 |
1e-141
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
1133 |
1521 |
1553 |
25.04 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12097.1 |
169 |
528 |
541 |
24.76 |
360 |
34 |
7e-57
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
1093 |
1480 |
1539 |
25.21 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold15499 |
Augustus |
mRNA |
349 |
4432 |
. |
+ |
. |
ID=Dca12097.1;Parent=Dca12097 |
| scaffold15499 |
Augustus |
exon |
349 |
859 |
. |
+ |
. |
ID=Dca12097.1.exon1;Parent=Dca12097.1 |
| scaffold15499 |
Augustus |
exon |
3127 |
3767 |
. |
+ |
. |
ID=Dca12097.1.exon2;Parent=Dca12097.1 |
| scaffold15499 |
Augustus |
exon |
3959 |
4432 |
. |
+ |
. |
ID=Dca12097.1.exon3;Parent=Dca12097.1 |
