Carnation DB

Dca12102.1

Annotation

8-exons
f-1
sp|F6HGP2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0016g01280#GO:0005666;GO:0003677;GO:0003899;GO:0006383#2F1P1C
AT5G09380.1 | Symbols: | RNA polymerase III RPC4 | chr5:2911313-2913136 REVERSE LENGTH=272
Repeat List (scaffold155)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12102.1	1	245	245	54.28	245	41	2e-50
Target_name	Start	End	Length	Cov(%)
sp\|F6HGP2_VITVI	1	325	325	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12102.1	9	244	245	45.3	236	40	3e-42
Target_name	Start	End	Length	Cov(%)
AT5G09380.1	4	272	272	98.89

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold155	Augustus	mRNA	64445	67698	.	-	.	ID=Dca12102.1;Parent=Dca12102
scaffold155	Augustus	exon	64445	64597	.	-	.	ID=Dca12102.1.exon1;Parent=Dca12102.1
scaffold155	Augustus	exon	65265	65501	.	-	.	ID=Dca12102.1.exon2;Parent=Dca12102.1
scaffold155	Augustus	exon	65836	65918	.	-	.	ID=Dca12102.1.exon3;Parent=Dca12102.1
scaffold155	Augustus	exon	66416	66484	.	-	.	ID=Dca12102.1.exon4;Parent=Dca12102.1
scaffold155	Augustus	exon	67188	67224	.	-	.	ID=Dca12102.1.exon5;Parent=Dca12102.1
scaffold155	Augustus	exon	67342	67399	.	-	.	ID=Dca12102.1.exon6;Parent=Dca12102.1
scaffold155	Augustus	exon	67516	67574	.	-	.	ID=Dca12102.1.exon7;Parent=Dca12102.1
scaffold155	Augustus	exon	67657	67698	.	-	.	ID=Dca12102.1.exon8;Parent=Dca12102.1