Carnation DB

Dca12105.1

Annotation

5-exons
f-1
sp|D7TZU1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_09s0002g01460#GO:0015935;GO:0003723;GO:0003735;GO:0006412#2F1P1C
AT5G35530.1 | Symbols: | Ribosomal protein S3 family protein | chr5:13710355-13712192 REVERSE LENGTH=248
Repeat List (scaffold155)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12105.1	1	229	240	88.33	229	93	3e-122
Target_name	Start	End	Length	Cov(%)
sp\|D7TZU1_VITVI	1	229	234	97.86

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12105.1	1	235	240	84.58	235	87	2e-117
Target_name	Start	End	Length	Cov(%)
AT5G35530.1	1	232	248	93.54

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold155	Augus-PASA	mRNA	79130	81596	.	+	.	ID=Dca12105.1;Parent=Dca12105
scaffold155	Augus-PASA	exon	79130	79307	.	+	.	ID=Dca12105.1.exon1;Parent=Dca12105.1
scaffold155	Augus-PASA	exon	79770	79941	.	+	.	ID=Dca12105.1.exon2;Parent=Dca12105.1
scaffold155	Augus-PASA	exon	81032	81086	.	+	.	ID=Dca12105.1.exon3;Parent=Dca12105.1
scaffold155	Augus-PASA	exon	81171	81302	.	+	.	ID=Dca12105.1.exon4;Parent=Dca12105.1
scaffold155	Augus-PASA	exon	81411	81596	.	+	.	ID=Dca12105.1.exon5;Parent=Dca12105.1