Carnation DB

Dca12111.1

Annotation

8-exons
f-1
sp|B9INA7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1105469#unknown#0F0P0C
AT5G20520.1 | Symbols: WAV2 | alpha/beta-Hydrolases superfamily protein | chr5:6943536-6946315 REVERSE LENGTH=308
Repeat List (scaffold155)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12111.1	1	316	316	81.96	316	82	1e-155
Target_name	Start	End	Length	Cov(%)
sp\|B9INA7_POPTR	1	317	317	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12111.1	1	306	316	76.89	306	80	2e-148
Target_name	Start	End	Length	Cov(%)
AT5G20520.1	1	306	308	99.35

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold155	Augus-PASA	mRNA	137197	143265	.	+	.	ID=Dca12111.1;Parent=Dca12111
scaffold155	Augus-PASA	exon	137197	137434	.	+	.	ID=Dca12111.1.exon1;Parent=Dca12111.1
scaffold155	Augus-PASA	exon	138327	138362	.	+	.	ID=Dca12111.1.exon2;Parent=Dca12111.1
scaffold155	Augus-PASA	exon	138509	138587	.	+	.	ID=Dca12111.1.exon3;Parent=Dca12111.1
scaffold155	Augus-PASA	exon	138724	138778	.	+	.	ID=Dca12111.1.exon4;Parent=Dca12111.1
scaffold155	Augus-PASA	exon	138856	138972	.	+	.	ID=Dca12111.1.exon5;Parent=Dca12111.1
scaffold155	Augus-PASA	exon	141207	141371	.	+	.	ID=Dca12111.1.exon6;Parent=Dca12111.1
scaffold155	Augus-PASA	exon	141848	142091	.	+	.	ID=Dca12111.1.exon7;Parent=Dca12111.1
scaffold155	Augus-PASA	exon	143249	143265	.	+	.	ID=Dca12111.1.exon8;Parent=Dca12111.1