Dca12135.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold15501)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12135.1 |
1 |
1010 |
1010 |
52.07 |
1010 |
48 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
60 |
1103 |
1501 |
69.55 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12135.1 |
440 |
1010 |
1010 |
22.37 |
571 |
40 |
6e-113
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
562 |
1097 |
1539 |
34.82 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold15501 |
Augustus |
mRNA |
4650 |
7923 |
. |
+ |
. |
ID=Dca12135.1;Parent=Dca12135 |
| scaffold15501 |
Augustus |
exon |
4650 |
5110 |
. |
+ |
. |
ID=Dca12135.1.exon1;Parent=Dca12135.1 |
| scaffold15501 |
Augustus |
exon |
5193 |
5854 |
. |
+ |
. |
ID=Dca12135.1.exon2;Parent=Dca12135.1 |
| scaffold15501 |
Augustus |
exon |
6015 |
7923 |
. |
+ |
. |
ID=Dca12135.1.exon3;Parent=Dca12135.1 |
