Dca12146.1
Annotation
- 3-exons
- f-1
- sp|B9N681_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_929846#GO:0005488;GO:0003824#2F0P0C
- AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein | chr5:3374443-3377332 REVERSE LENGTH=580
- Repeat List (scaffold15514)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12146.1 |
89 |
199 |
208 |
40.38 |
111 |
76 |
3e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9N681_POPTR |
60 |
170 |
607 |
18.28 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12146.1 |
89 |
197 |
208 |
33.65 |
109 |
65 |
5e-37
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G10690.1 |
58 |
166 |
580 |
18.79 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold15514 |
Augustus |
mRNA |
475 |
3746 |
. |
+ |
. |
ID=Dca12146.1;Parent=Dca12146 |
| scaffold15514 |
Augustus |
exon |
475 |
747 |
. |
+ |
. |
ID=Dca12146.1.exon1;Parent=Dca12146.1 |
| scaffold15514 |
Augustus |
exon |
3138 |
3320 |
. |
+ |
. |
ID=Dca12146.1.exon2;Parent=Dca12146.1 |
| scaffold15514 |
Augustus |
exon |
3576 |
3746 |
. |
+ |
. |
ID=Dca12146.1.exon3;Parent=Dca12146.1 |
