Carnation DB

Dca12171.1

Annotation

5-exons
f-1
sp|D7T103_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0085g01090#GO:0005643;GO:0006606#0F1P1C
Os02t0741500-01 Ribbon-helix-helix domain containing protein.
Repeat List (scaffold1553)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12171.1	1	2082	2177	50.71	2082	52	0
Target_name	Start	End	Length	Cov(%)
sp\|D7T103_VITVI	1	2065	2088	98.89

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12171.1	1	2080	2177	45.01	2080	45	0
Target_name	Start	End	Length	Cov(%)
AT1G79280.2	1	2086	2115	98.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1553	Augus-PASA	mRNA	30281	41636	.	-	.	ID=Dca12171.1;Parent=Dca12171
scaffold1553	Augus-PASA	exon	30281	30555	.	-	.	ID=Dca12171.1.exon1;Parent=Dca12171.1
scaffold1553	Augustus	exon	31541	34136	.	-	.	ID=Dca12171.1.exon2;Parent=Dca12171.1
scaffold1553	Augustus	exon	34274	36753	.	-	.	ID=Dca12171.1.exon3;Parent=Dca12171.1
scaffold1553	Augustus	exon	37238	38108	.	-	.	ID=Dca12171.1.exon4;Parent=Dca12171.1
scaffold1553	Augustus	exon	41325	41636	.	-	.	ID=Dca12171.1.exon5;Parent=Dca12171.1