Carnation DB

Dca12195.1

Annotation

10-exons
f-1
sp|C6TD87_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#unknown#0F0P0C
sp|B9SCC1_RICCO#WD-repeat protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0891600#GO:0016905#1F0P0C
Repeat List (scaffold1555)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12195.1	6	316	319	85.57	311	88	2e-166
Target_name	Start	End	Length	Cov(%)
sp\|C6TD87_SOYBN	3	312	316	98.1

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12195.1	6	316	319	79.31	311	82	2e-155
Target_name	Start	End	Length	Cov(%)
Os03t0681700-01	3	312	317	97.79

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1555	Augus-PASA	mRNA	23113	27941	.	-	.	ID=Dca12195.1;Parent=Dca12195
scaffold1555	Augus-PASA	exon	23113	23237	.	-	.	ID=Dca12195.1.exon1;Parent=Dca12195.1
scaffold1555	Augus-PASA	exon	23855	23914	.	-	.	ID=Dca12195.1.exon2;Parent=Dca12195.1
scaffold1555	Augus-PASA	exon	24019	24101	.	-	.	ID=Dca12195.1.exon3;Parent=Dca12195.1
scaffold1555	Augus-PASA	exon	25804	25898	.	-	.	ID=Dca12195.1.exon4;Parent=Dca12195.1
scaffold1555	Augus-PASA	exon	25988	26104	.	-	.	ID=Dca12195.1.exon5;Parent=Dca12195.1
scaffold1555	Augus-PASA	exon	26442	26519	.	-	.	ID=Dca12195.1.exon6;Parent=Dca12195.1
scaffold1555	Augus-PASA	exon	26978	27047	.	-	.	ID=Dca12195.1.exon7;Parent=Dca12195.1
scaffold1555	Augus-PASA	exon	27144	27256	.	-	.	ID=Dca12195.1.exon8;Parent=Dca12195.1
scaffold1555	Augus-PASA	exon	27349	27450	.	-	.	ID=Dca12195.1.exon9;Parent=Dca12195.1
scaffold1555	Augus-PASA	exon	27825	27941	.	-	.	ID=Dca12195.1.exon10;Parent=Dca12195.1