Dca12217.1
Annotation
- 2-exons
- f-1
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold15567)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12217.1 |
150 |
466 |
472 |
41.1 |
317 |
59 |
4e-117
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9FZN9_ARATH |
1256 |
1583 |
1864 |
17.59 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12217.1 |
152 |
428 |
472 |
19.06 |
277 |
32 |
4e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
866 |
1112 |
1539 |
16.04 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold15567 |
Augustus |
mRNA |
756 |
4386 |
. |
+ |
. |
ID=Dca12217.1;Parent=Dca12217 |
| scaffold15567 |
Augustus |
exon |
756 |
1205 |
. |
+ |
. |
ID=Dca12217.1.exon1;Parent=Dca12217.1 |
| scaffold15567 |
Augustus |
exon |
3418 |
4386 |
. |
+ |
. |
ID=Dca12217.1.exon2;Parent=Dca12217.1 |
