Dca12229.1
Annotation
- 3-exons
- f-1
- sp|A5APF3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_020488#GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P0C
- Os08t0202300-03 Reverse transcriptase domain containing protein.
- Repeat List (scaffold15573)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12229.1 |
502 |
549 |
550 |
5.27 |
48 |
61 |
1e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5APF3_VITVI |
2253 |
2300 |
2301 |
2.08 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12229.1 |
6 |
351 |
550 |
20 |
346 |
32 |
5e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
234 |
574 |
707 |
48.23 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold15573 |
Augustus |
mRNA |
6688 |
9753 |
. |
+ |
. |
ID=Dca12229.1;Parent=Dca12229 |
| scaffold15573 |
Augustus |
exon |
6688 |
7792 |
. |
+ |
. |
ID=Dca12229.1.exon1;Parent=Dca12229.1 |
| scaffold15573 |
Augustus |
exon |
7893 |
8266 |
. |
+ |
. |
ID=Dca12229.1.exon2;Parent=Dca12229.1 |
| scaffold15573 |
Augustus |
exon |
9580 |
9753 |
. |
+ |
. |
ID=Dca12229.1.exon3;Parent=Dca12229.1 |
