Dca1223.1
Annotation
- 2-exons
- f-1
- sp|O82216_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g23880#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold1035)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1223.1 |
13 |
74 |
128 |
26.56 |
62 |
55 |
2e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O82216_ARATH |
163 |
224 |
1216 |
5.09 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1223.1 |
17 |
74 |
128 |
17.96 |
58 |
40 |
2e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G43760.1 |
525 |
581 |
626 |
9.1 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1035 |
Augustus |
mRNA |
41722 |
42696 |
. |
+ |
. |
ID=Dca1223.1;Parent=Dca1223 |
| scaffold1035 |
Augustus |
exon |
41722 |
41946 |
. |
+ |
. |
ID=Dca1223.1.exon1;Parent=Dca1223.1 |
| scaffold1035 |
Augustus |
exon |
42535 |
42696 |
. |
+ |
. |
ID=Dca1223.1.exon2;Parent=Dca1223.1 |
