Dca12245.1
Annotation
- 2-exons
- f-3
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold15586)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12245.1 |
27 |
267 |
336 |
51.48 |
241 |
65 |
1e-95
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
492 |
757 |
1717 |
15.49 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12245.1 |
38 |
130 |
336 |
10.41 |
93 |
38 |
1e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold15586 |
Augustus |
mRNA |
11361 |
12450 |
. |
- |
. |
ID=Dca12245.1;Parent=Dca12245 |
| scaffold15586 |
Augustus |
exon |
11361 |
11885 |
. |
- |
. |
ID=Dca12245.1.exon1;Parent=Dca12245.1 |
| scaffold15586 |
Augustus |
exon |
11963 |
12450 |
. |
- |
. |
ID=Dca12245.1.exon2;Parent=Dca12245.1 |
