Carnation DB

Dca12332.1

Annotation

6-exons
f-1
sp|B9IKE4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1105729#unknown#0F0P0C
AT4G33210.1 | Symbols: SLOMO | F-box family protein | chr4:16015971-16020697 REVERSE LENGTH=990
Repeat List (scaffold1561)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12332.1	56	402	409	52.32	347	60	2e-112
Target_name	Start	End	Length	Cov(%)
sp\|B9IKE4_POPTR	52	404	957	36.88

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12332.1	154	402	409	41.56	249	69	1e-99
Target_name	Start	End	Length	Cov(%)
AT4G33210.1	189	437	990	25.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1561	Augustus	mRNA	30285	34586	.	-	.	ID=Dca12332.1;Parent=Dca12332
scaffold1561	Augustus	exon	30285	30579	.	-	.	ID=Dca12332.1.exon1;Parent=Dca12332.1
scaffold1561	Augustus	exon	30682	30879	.	-	.	ID=Dca12332.1.exon2;Parent=Dca12332.1
scaffold1561	Augustus	exon	30957	31056	.	-	.	ID=Dca12332.1.exon3;Parent=Dca12332.1
scaffold1561	Augustus	exon	32193	32325	.	-	.	ID=Dca12332.1.exon4;Parent=Dca12332.1
scaffold1561	Augustus	exon	32540	32792	.	-	.	ID=Dca12332.1.exon5;Parent=Dca12332.1
scaffold1561	Augustus	exon	34336	34586	.	-	.	ID=Dca12332.1.exon6;Parent=Dca12332.1