Dca12335.1
Annotation
- 2-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold15612)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12335.1 |
2 |
687 |
728 |
48.62 |
686 |
51 |
1e-177
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
128 |
788 |
1717 |
38.49 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12335.1 |
404 |
496 |
728 |
4.8 |
93 |
38 |
8e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold15612 |
Augustus |
mRNA |
2067 |
4338 |
. |
- |
. |
ID=Dca12335.1;Parent=Dca12335 |
| scaffold15612 |
Augustus |
exon |
2067 |
3256 |
. |
- |
. |
ID=Dca12335.1.exon1;Parent=Dca12335.1 |
| scaffold15612 |
Augustus |
exon |
3342 |
4338 |
. |
- |
. |
ID=Dca12335.1.exon2;Parent=Dca12335.1 |
