Carnation DB

Dca12352.1

Annotation

5-exons
f-1
sp|A5B2R9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_007899#GO:0006355#0F1P0C
AT4G33880.1 | Symbols: RSL2 | ROOT HAIR DEFECTIVE 6-LIKE 2 | chr4:16239566-16241052 REVERSE LENGTH=352
Repeat List (scaffold1563)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12352.1	5	345	353	44.47	341	43	1e-53
Target_name	Start	End	Length	Cov(%)
sp\|A5B2R9_VITVI	10	369	380	94.73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12352.1	188	345	353	30.59	158	56	2e-45
Target_name	Start	End	Length	Cov(%)
AT4G33880.1	158	348	352	54.26

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1563	Augustus	mRNA	32936	34752	.	+	.	ID=Dca12352.1;Parent=Dca12352
scaffold1563	Augustus	exon	32936	33568	.	+	.	ID=Dca12352.1.exon1;Parent=Dca12352.1
scaffold1563	Augustus	exon	33658	33861	.	+	.	ID=Dca12352.1.exon2;Parent=Dca12352.1
scaffold1563	Augustus	exon	33981	34046	.	+	.	ID=Dca12352.1.exon3;Parent=Dca12352.1
scaffold1563	Augustus	exon	34164	34229	.	+	.	ID=Dca12352.1.exon4;Parent=Dca12352.1
scaffold1563	Augustus	exon	34660	34752	.	+	.	ID=Dca12352.1.exon5;Parent=Dca12352.1