Dca12358.1
Annotation
- 3-exons
- f-3
- sp|Q9SJP0_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g15410#GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold15635)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12358.1 |
234 |
501 |
501 |
36.12 |
268 |
68 |
1e-112
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9SJP0_ARATH |
786 |
1053 |
1787 |
14.99 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12358.1 |
237 |
497 |
501 |
15.76 |
261 |
31 |
6e-41
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
27 |
286 |
591 |
43.99 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold15635 |
Augustus |
mRNA |
157 |
4340 |
. |
+ |
. |
ID=Dca12358.1;Parent=Dca12358 |
| scaffold15635 |
Augustus |
exon |
157 |
282 |
. |
+ |
. |
ID=Dca12358.1.exon1;Parent=Dca12358.1 |
| scaffold15635 |
Augustus |
exon |
978 |
1552 |
. |
+ |
. |
ID=Dca12358.1.exon2;Parent=Dca12358.1 |
| scaffold15635 |
Augustus |
exon |
3534 |
4340 |
. |
+ |
. |
ID=Dca12358.1.exon3;Parent=Dca12358.1 |
